in
Title : |
Classification of Nepalese rice cultivars based on Isozymes |
Material Type: |
printed text |
Authors: |
B.K. Joshi ; H.P Bimb, Author |
Pagination: |
175-187 p. |
Languages : |
English (eng) |
Keywords: |
Varietal classification ; isozyme rice cultivars |
Abstract: |
Classification of large variation within Oryza sativa has been importance for breeders and geneticists. A total of 39 Nepalese rice cultivars including one non-released, Fuji-102 were classified and evaluated their characteristics features of eight isozyme systems, Alcohol dehydrogenase (ADH), Acid phosphatase (ACP), Esterase (EST), lsocitrate dehydrogenase (IDH), Malate dehydrogenase (MDH), Malic enzyme (ME), Peroxidase (POX) and Shikimate dehydrogenase (SDH). Plumules and coleoptiles of 3-5 seedlings of each cultivar were used to extract enzyme tfSing Sodium ascorbate extraction buffer at pH 7.4. These were electrophoresed and enzymes were detected after staining in an appropriate staining mixture. Cluster and principal component analyses were applied on binary data matrix. Zymograms were presented separately for each enzyme and each varietal type. A to tal of 28, 19 and 23 distinct electromorphs were used as iso:;ymic descriptors for indica, intermediate and japonica varietal types respectively. Multivariate analysis grouped these cultivars into 3. These were reclassified in indica (22), intermediate (3} andjaponica (14) varietal types. There were sixteen loci coding eight isozyme systems. All loci were f ound in indica group, /4 loci in intermediate and 15 in japonica. Most of the enzyme systems expressed distinct zymogramsfor indica andjaponica. Highest zymotypes were expressed by POX Loci Mdh-3 and Sdh-1 have highest number of alleles within indica type, Pox-] within intermediate and Sdh-1 and Pox-/ withinjaponica types. Locus Mdh-2 was not noticed in intermediate andjaponica groups. Loci Mdh-3, Est-2 and Sdh-1 .showed hfg~est gene diversity within indica, intermediate and j aponica rypes respectively. Among the four multilocus -enzymes, three were polymorphic. All loci except Pox-4 were polymorhpic in intermediate varietal types. all loci were polymorhpihc in indica and except Pox-3 and Adh:-1 all loci were polymorphic considering null allele injaponica. This isozymic variation within and between varietal types can be itseful for further study and the isozyme profiles of each cultivar can be used to trace their identity. |
Link for e-copy: |
http://elibrary.narc.gov.np/?r=1100 |
in
Classification of Nepalese rice cultivars based on Isozymes [printed text] / B.K. Joshi ; H.P Bimb, Author . - [s.d.] . - 175-187 p. Languages : English ( eng) Keywords: |
Varietal classification ; isozyme rice cultivars |
Abstract: |
Classification of large variation within Oryza sativa has been importance for breeders and geneticists. A total of 39 Nepalese rice cultivars including one non-released, Fuji-102 were classified and evaluated their characteristics features of eight isozyme systems, Alcohol dehydrogenase (ADH), Acid phosphatase (ACP), Esterase (EST), lsocitrate dehydrogenase (IDH), Malate dehydrogenase (MDH), Malic enzyme (ME), Peroxidase (POX) and Shikimate dehydrogenase (SDH). Plumules and coleoptiles of 3-5 seedlings of each cultivar were used to extract enzyme tfSing Sodium ascorbate extraction buffer at pH 7.4. These were electrophoresed and enzymes were detected after staining in an appropriate staining mixture. Cluster and principal component analyses were applied on binary data matrix. Zymograms were presented separately for each enzyme and each varietal type. A to tal of 28, 19 and 23 distinct electromorphs were used as iso:;ymic descriptors for indica, intermediate and japonica varietal types respectively. Multivariate analysis grouped these cultivars into 3. These were reclassified in indica (22), intermediate (3} andjaponica (14) varietal types. There were sixteen loci coding eight isozyme systems. All loci were f ound in indica group, /4 loci in intermediate and 15 in japonica. Most of the enzyme systems expressed distinct zymogramsfor indica andjaponica. Highest zymotypes were expressed by POX Loci Mdh-3 and Sdh-1 have highest number of alleles within indica type, Pox-] within intermediate and Sdh-1 and Pox-/ withinjaponica types. Locus Mdh-2 was not noticed in intermediate andjaponica groups. Loci Mdh-3, Est-2 and Sdh-1 .showed hfg~est gene diversity within indica, intermediate and j aponica rypes respectively. Among the four multilocus -enzymes, three were polymorphic. All loci except Pox-4 were polymorhpic in intermediate varietal types. all loci were polymorhpihc in indica and except Pox-3 and Adh:-1 all loci were polymorphic considering null allele injaponica. This isozymic variation within and between varietal types can be itseful for further study and the isozyme profiles of each cultivar can be used to trace their identity. |
Link for e-copy: |
http://elibrary.narc.gov.np/?r=1100 |
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